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Öğrencilerimizin Yayınları

AKADEMİK

FAKÜLTELER
FEN-EDEBİYAT FAKÜLTESİ

Ezgi TAŞKAN

  • Preclinical Studies on Convalescent Human Immune Plasma-Derived Exosome: Omics and Antiviral Properties to SARS-CoV-2
  • Investigating the neuroprotective effects of nicotinamide adenine dinucleotide precursors
  • Functional Characterization of c.487insTGC and c.2555A>G vWF Gene Variants Identified in the Type 2 vWD Patient Population in Turkey


Gülru ÖZAKMAN

  • The influence of selenium on expression levels of the rbcL gene in Chlorella vulgaris


Tuğçe DALLI

  • Thymoquinone administration ameliorates Alzheimer’s disease-like phenotype by promoting cell survival in the hippocampus of amyloid beta1-42 infused rat model
  • Effect of Restraint Stress on Plasma PTH Concentration and Its Molecular Targets Expressions in Wistar Rats
  • Thymoquinone activates MAPK pathway in hippocampus of streptozotocin-treated rat model
  • Thymoquinone Can Improve Neuronal Survival and Promote Neurogenesis in Rat Hippocampal Neurons


Bedri Burak DURAKSOY

  • High-level heterologous expression of active Chaetomium thermophilum FDH in Pichia pastoris
  • Production of Engineered Formate Dehydrogenase for CO2 Reduction


Mehmet Mervan ÇAKAR

  • Enzyme Reaction Engineering as a Tool to Investigate the Potential Application of Enzyme Reaction Systems
  • From Secretion in Pichia pastoris to Application in Apple Juice Processing: Exo-Polygalacturonase from Sporothrix schenckii 1099-18
  • Optimisation of the Production and Bleaching Process for a New Laccase from Madurella mycetomatis, Expressed in Pichia pastoris: from

Secretion to Yielding Prominent

  • Correction to: Optimisation of the Production and Bleaching Process for a New Laccase from Madurella mycetomatis, Expressed in Pichia pastoris: from Secretion to Yielding Prominent
  • Investigation new positions for catalytic activity of Chaetomium thermophilum and Ceriporiopsis subvermispora formate dehydrogenases
  • Engineered formate dehydrogenase from Chaetomium thermophilum, a promising enzymatic solution for biotechnical CO2 fixation
  • Tailoring of recombinant FDH: effect of histidine tag location on solubility and catalytic properties of Chaetomium thermophilum formate dehydrogenase (CtFDH)
  • Enhanced production of recombinant Staphylococcus simulans lysostaphin using medium engineering
  • Production of Engineered Formate Dehydrogenase for CO2 Reduction
  • Molecular Dynamics and Docking Simulations on the Formate Dehydrogenase Enzymes
  • Polyhistidine Tag Effect on Solubility and Activity of Chaetomium thermophilum Formate Dehydrogenase (CtFDH)
  • Discovery of a New Metal and NAD+-Dependent Formate Dehydrogenase from Clostridium ljungdahlii
  • Discovery of New Formate Dehydrogenases for CO2 Reduction
  • Problem of the Century: The Emission of Carbon Dioxide (CO2): An Ezymatic Solution
  • Identification a New NAD-Dependent Formate Dehydrogenase From Anaerobic Clostridium Ljungdahlii

 

Alper BULUTOĞLU

  • Comparing the levels of CTLA‐4 dependent biological defects in patients with LRBA deficiency and CTLA‐4 insufficiency
  • Clinical and Laboratory Factors Affecting the Prognosis of Severe Combined Immunodeficiency
  • A boy with a novel homozygous ZAP70 mutation presenting with a dermatological phenotype and postnatal decrease in CD8+ T cells

 

Oğuzhan KAYA

  • High-throughput scNMT protocol for multiomics profiling of single cells from mouse brain and pancreatic organoids
  • Cdk4 and Cdk6 Couple the Cell-Cycle Machinery to Cell Growth via mTORC1
  • Guided tissue organization and disease modeling in a kidney tubule array

 

Hasan ÇUBUK

  • In silico analysis of SARS-CoV-2 spike protein N501Y and N501T mutations effects on human ACE2 binding
  • A Review of Functional Characterization of Single Amino Acid Change Mutations in HNF Transcription Factors in MODY Pathogenesis
  • Computational analysis of functional monomers used in molecular imprinting for promising COVID-19 detection
  • Comparison of clinically approved molecules on SARS-CoV-2 drug target proteins: a molecular docking study
  • A Promising Strategy Against SARS-CoV-2 Infected Patients: Antisense Therapy

 

Elif ÖZBAY

  • An analysis for proteomic profile of NeuroD2 related changes in N2A neuroblastoma cell line
  • Phosphodiesterase 10A Is a Critical Target for Neuroprotection in a Mouse Model of Ischemic Stroke
  • Beyin hasarı sonrası Bmal1 proteininin etkilediği sinyal yolaklarının proteomik analizi/ Investigation of the role of Bmal1 following brain injury using proteomic approach

 

Gizem Nur DURAN

  • Antiviral activity and molecular modeling studies on 1H-indole-2,3-diones carrying a naphthalene moiety
  • Selagibenzophenone Derivatives as novel dual Topoisomerase I/II inhibitors: In vitro biological evaluation and in silico approaches
  • Structural rearrangement of Neisseria meningitidis transferrin binding protein A (TbpA) prior to human transferrin protein (hTf) binding
  • Synthesis, in vitro cytotoxic and apoptotic effects, and molecular docking study of novel adamantane derivatives
  • Synthesis, molecular modeling and antiviral activity of novel 5-fluoro-1H-indole-2,3-dione 3-thiosemicarbazones

 

Saliha SURME

  • Novel small molecule stabilizes the Cryptochromes, and controls hunger blood glucose levels in ob/ob and fat-induced mice.
  • Identification of small organic molecules that regulate the half-life of Cryptochrome-1 and Cryptochrome-2
  • Nanoengineering InP Quantum Dot-Based Photoactive Biointerfaces for Optical Control of Neurons
  • The Arg293 of Cryptochrome1 is responsible for the allosteric regulation of CLOCK-CRY1 binding in circadian rhythm
  • Organic Photovoltaic Pseudocapacitors for Neurostimulation
  • Identification of the Importin-Alpha Sub-Type that is Responsible for the Import of HNF1A Transcription Factor into the Nucleus and the Analysis of the Nuclear Localization Signal (NLS)

 

Berin YILMAZER

  • Comparative structural and kinetic study for development of a novel candidate L-asparaginase based pharmaceutical
  • Application of Reductive Amination by Heterologously Expressed Thermomicrobium Roseum L-Alanine Dehydrogenase to Synthesize L-Alanine Derivatives
  • Enhancing recombinant Chaetomium thermophilium Formate Dehydrogenase Expression with CRISPR Technology
  • Conserved Amino Acid Residues that Affect Structural Stability of Candida boidinii Formate Dehydrogenase
  • Investigation new positions for catalytic activity of Chaetomium thermophilum and Ceriporiopsis subvermispora formate dehydrogenases
  • Structural insights into the NAD+-dependent formate dehydrogenase mechanism revealed from the NADH complex and the formate NAD+ ternary complex of the Chaetomium thermophilum enzyme
  • Effect of Metal Ions on the Activity of Ten NAD-Dependent Formate Dehydrogenases
  • Functional effects of active site mutations in NAD+-dependent formate dehydrogenases on transformation of hydrogen carbonate to formate
  • Problem of the Century: The Emission of Carbon Dioxide (CO2): An Ezymatic Solution

 

Kübra TELLİ

  • Epithelial-mesenchymal transition as a potential route for DAPT resistance in breast cancer cells
  • HologLev: A Hybrid Magnetic Levitation Platform Integrated with Lensless Holographic Microscopy for Density-Based Cell Analysis

 

 

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